Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs13195636 | chr6:27509493 | A/C | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13195728 | chr6:27771106 | T/C | 2.01E-7 | 212 | 16.53 | 12.8 | 9.77 | KM Plot |
| KIRP | rs13197175 | chr6:28129231 | C/T | 2.34E-7 | 212 | 16.43 | 15.02 | 9.77 | KM Plot |
| KIRP | rs13197176 | chr6:28129232 | C/T | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs13197574 | chr6:28060239 | T/C | 4.75E-7 | 213 | 15.88 | 16.68 | 9.77 | KM Plot |
| KIRP | rs13197633 | chr6:28174757 | G/A | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs13198716 | chr6:26582035 | A/G | 1.99E-7 | 214 | 9.77 | 13.6 | 16.45 | KM Plot |
| KIRP | rs13198809 | chr6:28323702 | G/A | 2.37E-7 | 211 | 16.47 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13199649 | chr6:27868792 | C/T | 2.69E-7 | 212 | 16.43 | 12.8 | 9.77 | KM Plot |
| KIRP | rs13199772 | chr6:27834085 | A/G | 1.98E-7 | 214 | 16.47 | 12.8 | 9.77 | KM Plot |
| KIRP | rs13199906 | chr6:27834139 | C/G | 1.98E-7 | 214 | 16.47 | 12.8 | 9.77 | KM Plot |
| KIRP | rs13201308 | chr6:28130089 | C/T | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs13202291 | chr6:27698857 | A/G | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13202295 | chr6:27698837 | C/T | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |
| KIRP | rs13202775 | chr6:27564879 | T/C | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |